This research explored the effects of the addition of low doses of aromatic plant biomasses (APBs) on the microbial community and carbon source decomposition in compost. APBs were reported to be capable of altering the composition and function of microbial communities in many environments. However, the effects of APB addition on the compost carbon source metabolism, a process highly linked to the microbial community of compost, were still unclarified, especially when added in small doses. In this study, Cinnamomum camphora biomass was added to the initial compost of Stropharia rugosoannulata cultivation materials, in a mass ratio of 0%, 1%, 2%, and 3%, respectively. The variation in the carbon source contents, the microbial community composition, and the related enzyme activities of the end compost products were measured. The results showed that Cinnamomum camphora biomass addition significantly altered the content of cellulose, hemicellulose, lignin, and protein of compost products, but did not affect the starch and soluble sugar content. Meanwhile, the addition significantly reduced lignin peroxidase and cellulase activities, but increased xylanase and laccase activities, and had no effect on magnesium peroxidase and polyphenol oxidase. Both the bacterial and fungal community compositions were significantly altered by the addition, though the alpha diversity indexes were not significantly changed. The relative abundance of Proteobacteria and Sordariomycetes was significantly increased by the addition, while Acidobacteria, Chloroflexi and Eurotiomycetes significantly decreased. Structural equation modeling found that the variation in the bacterial community composition (0.464 standard total effect) provided a higher contribution to lignocellulose degradation, rather than the fungal community (0.365 standard total effect). A co-occurrence network analysis further revealed that the trade-off between lignin peroxidase and laccase activity, which was induced by the relative abundance variation in Proteobacteria, Actinobacteriota, and Firmicute members, was the main driver in the lignocellulose decomposition variation. This research provides a new insight into the recycling of APB waste, and offers an improvement to mushroom cultivation material compost.
Replanting is a widely used method for improving the health and carbon sequestration capacity of degraded forests. However, its impact on soil carbon pools remains controversial. This study investigated the effects of replanting broadleaf Phoebe bournei (Hemsl.) Yang in a typical degraded fir forest. Soil carbon content, nutrient levels, and microbial community structure and function were measured at 0, 5, 8, and 12 years after replanting. The degraded fir forests were originally limited in nitrogen and phosphorus. Phoebe bournei replanting significantly increased soil total carbon but reduced total nitrogen and phosphorus levels, resulting in increased soil carbon:nitrogen, carbon:phosphorus, and nitrogen:phosphorus ratios. Microbial biomass carbon, nitrogen, and phosphorus were all significantly reduced, whereas microbial carbon:phosphorus and nitrogen:phosphorus ratios were enhanced. Enzyme activities related to nutrient cycling and carbon decomposition (acidic invertase, polyphenol oxidase, peroxidase, urase, nitrate reductase, and acidic phosphatase activities) were significantly lowered by replanting. Microbial richness and diversity significantly increased, and microbial community composition changed significantly due to replanting. Structural equation modeling revealed the significant role of total phosphorus in microbial biomass, microbial community composition, and enzyme activity, highlighting it as the main factor accelerating soil carbon accumulation. Network analysis identified Leifsonia, Bradyrhizobium, and Mycolicibacterium members as key microbial players in the soil carbon cycle. In summary, P. bournei replanting exacerbated soil phosphorus deficiency, leading to a decrease in soil microbial biomass and changes in community structure, reduced nutrient cycling and carbon-decomposition-related enzyme activities, less litter decomposition, and increased organic carbon accumulation. These findings demonstrate the importance of nutrient limitation in promoting soil carbon accumulation and offer new insights for soil carbon regulation strategies in forestry.
Abstract Ecosystem degradation is a process during which different ecosystem components interact and affect each other. The microbial community, as a component of the ecosystem whose members often display high reproduction rates, is more readily able to respond to environmental stress at the compositional and functional levels, thus potentially threatening other ecosystem components. However, very little research has been carried out on how microbial community degradation affects other ecosystem components, which hampers the comprehensive understanding of ecosystems as a whole. In this study, we investigated the variation in a soil microbial community through the extinction gradient of an ectomycorrhizal species ( Tricholomas matsutake ) and explored the relationship between microbial community degradation and ectomycorrhizal species extinction. The result showed that during degradation, the microbial community switched from an interactive state to a stress tolerance state. During degradation, the interactivity of the microbial community decreased from average degree (avgK) 3.54 of undegraded state to 1.63 of degraded state, and the interactivity parameter was significantly related to T. matsutake dominance (R 2 = 0.953, p < 0.05). The reduced community interactions with T. matsutake marginalized it from a large central interactive module (67 nodes with 399 intra‐module links and 86 inter‐module links) to a small peripheral module (four nodes with three intra‐module links and no inter‐module links), eventually leading to its extinction. This study highlights the mechanisms of T. matsutake extinction due to the loss of soil microbial community interactivity, offering valuable information about soil microbial community degradation and the plant ectomycorrhizal species conservation.
Denitrifying anaerobic methane oxidation (DAMO) is a vital methane sink in wetlands. However, the interactions and niche partitioning of DAMO bacteria and archaea in freshwater wetland soils, in addition to the interactions among microorganisms that couple methane and nitrogen cycling is still unclear, despite that these factors may govern the fate of methane and nitrogen in wetlands. Here, we evaluated the vertical distribution of DAMO bacteria and archaea in soil layers along with the potential interactions among populations in the methane-coupled nitrogen cycling microbial community of Tibetan freshwater wetlands. A combination of molecular biology, stable isotope tracer technology, and microbial bioinformatics was used to evaluate these interrelated dynamics. The abundances and potential methane oxidation rates indicated that DAMO bacteria and archaea differentially occupy surface and subsurface soil layers, respectively. The inferred interactions between DAMO bacteria and nitrogen cycling microorganisms within their communities are complex, DAMO bacteria apparently achieve an advantage in the highly competitive environment of surface soils layers and occupy a specific niche in those environments. Conversely, the apparent relationships between DAMO archaea and nitrogen cycling microorganisms are relatively simple, wherein high levels of cooperation are inferred between DAMO archaea and nitrate-producing organisms in subsurface soils layers. These results suggest that the vertical distribution patterns of DAMO bacteria and archaea enable them to play significant roles in the methane oxidation activity of different soil layers and collectively form an effective methane filtration consortium.
Mountain glaciers are retreating at an unprecedented rate due to global warming. Glacier retreat is widely believed to be driven by the physiochemical characteristics of glacier surfaces; however, the current knowledge of such biological drivers remains limited. An estimated 130 Tg of organic carbon (OC) is stored in mountain glaciers globally. As a result of global warming, the accelerated microbial decomposition of OC may further accelerate the melting process of mountain glaciers by heat production with the release of greenhouse gases, such as carbon dioxide (CO2 ) and methane. Here, using short-term aerobic incubation data from the forefield of Urumqi Glacier No. 1, we assessed the potential climate feedback mediated by soil microbiomes at temperatures of 5°C (control), 6.2°C (RCP 2.6), 11°C (RCP 8.5), and 15°C (extreme temperature). We observed enhanced CO2 -C release and heat production under warming conditions, which led to an increase in near-surface (2 m) atmospheric temperatures, ranging from 0.9°C to 3.4°C. Warming significantly changed the structures of the RNA-derived (active) and DNA-derived (total) soil microbiomes, and active microbes were more sensitive to increased temperatures than total microbes. Considering the positive effects of temperature and deglaciation age on the CO2 -C release rate, the alterations in the active microbial community structure had a negative impact on the increased CO2 -C release rate. Our results revealed that glacial melting could potentially be significantly accelerated by heat production from increased microbial decomposition of OC. This risk might be true for other high-altitude glaciers under emerging warming, thus improving the predictions of the effects of potential feedback on global warming.
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