Abstract. Chromophoric dissolved organic matter (CDOM) significantly contributes to the non-water absorption budget in the Mediterranean Sea. The absorption coefficient of CDOM, αCDOM(λ), is measurable in situ and remotely from different platforms and can be used as an indicator of the concentration of other relevant biogeochemical variables, e.g., dissolved organic carbon. However, our ability to model the biogeochemical processes that determine CDOM concentrations is still limited. Here we propose a novel parametrisation of the CDOM cycle that accounts for the interplay between the light- and nutrient-dependent dynamics of local CDOM production and degradation, as well as its vertical transport. The parameterization is included in a one-dimensional (1D) configuration of the Biogeochemical Flux Model (BFM), which is here coupled to the General Ocean Turbulence Model (GOTM) through the Framework for Aquatic Biogeochemical Models (FABM). Here BFM is augmented with a bio-optical component that revolves spectrally the underwater light transmission. We did run this new GOTM-FABM-BFM configuration to simulate the seasonal αCDOM(λ) cycle at the deep-water site of the BOUSSOLE project in the North-Western Mediterranean Sea. Our results show that accounting for both nutrient and light dependence of CDOM production improves the simulation of the seasonal and vertical dynamics of αCDOM(λ), including a subsurface maximum that forms in spring and progressively intensifies in summer. Furthermore, the model consistently reproduces the higher-than-average concentrations of CDOM per unit chlorophyll concentration observed at BOUSSOLE. The configuration, outputs and sensitivity analyses from this 1D model application will be instrumental for future applications of BFM to the entire Mediterranean Sea in a 3D configuration.
Abstract. Numerical models of ocean biogeochemistry are becoming a major tool to detect and predict the impact of climate change on marine resources and ocean health. Classically, validation of such models relies on comparison with surface quantities from satellite (such as chlorophyll-a concentrations), climatologies, or sparse in situ data (such as cruises observations, and permanent fixed oceanic stations). However, these datasets are not fully suitable to assess how models represent many climate-relevant biogeochemical processes. These limitations now begin to be overcome with the availability of a large number of vertical profiles of light, pH, oxygen, nitrate, chlorophyll-a concentrations and particulate backscattering acquired by the Biogeochemical-Argo (BGC-Argo) floats network. Additionally, other key biogeochemical variables such as dissolved inorganic carbon and alkalinity, not measured by floats, can be predicted by machine learning-based methods applied to float oxygen concentrations. Here, we demonstrate the use of the global array of BGC-Argo floats for the validation of biogeochemical models at the global scale. We first present 18 key metrics of ocean health and biogeochemical functioning to quantify the success of BGC model simulations. These metrics are associated with the air-sea CO2 flux, the biological carbon pump, oceanic pH, oxygen levels and Oxygen Minimum Zones (OMZs). The metrics are either a depth-averaged quantity or correspond to the depth of a particular feature. We also suggest four diagnostic plots for displaying such metrics.
Abstract. The Mediterranean Forecasting Systems produces operational analyses, reanalyses and 10-day forecasts for many Essential Ocean Variables (EOVs), from currents, temperature to wind waves and pelagic biogeochemistry. The products are available at a horizontal resolution of 1/24 degrees (approximately 4 km) and 141 unevenly spaced vertical levels. The core of the Mediterranean Forecasting System is constituted by the physical (PHY), the biogeochemical (BIO) and the wave (WAV) components coupled offline, consisting of both numerical models and data assimilation modules. The 3 components together constitute the so-called Mediterranean Monitoring and Forecasting Center (Med-MFC) of the Copernicus Marine Service. Daily 10-day forecasts are produced by the PHY, BIO and WAV components as well as analyses, while reanalyses are produced for the past 30 years about every ~3 years and extended (yearly). The modelling systems, their coupling strategy and evolution is illustrated in detail. For the first time, the quality of the products is documented in terms of skill metrics evaluated on a common three-year period (2018–2020), giving the first complete assessment of uncertainties for all the Mediterranean environmental variable analyses.
Abstract. The quality of the upgraded version of the CMEMS biogeochemical operational system of the Mediterranean Sea (MedBFM) is assessed in terms of consistency and forecast skill, following a mixed validation protocol that exploits different reference data from satellite, oceanographic databases, Biogeochemical Argo floats, literature. We demonstrate that the GODAE metrics paradigm can be efficiently applied to validate an operational model system for biogeochemical and ecosystem forecasts. The accuracy of the CMEMS biogeochemical products for Mediterranean Sea can be achieved from basin-wide and seasonal scale to mesoscale and weekly scale, and its level depends on the specific variable and the availability of reference data. In particular, the use of the Biogeochemical Argo floats data allows for a relevant enhancement of the validation framework of operational biogeochemical models, providing new skill metrics for key biogeochemical processes and dynamics (e.g. deep chlorophyll maximum depth), which can be easily implemented to routinely monitor the quality of the products and highlight any possible anomaly.
Abstract We describe a new, state‐of‐the‐art, Earth System Regional Climate Model (RegCM‐ES), which includes the coupling between the atmosphere, ocean, and land surface, as well as a hydrological and ocean biogeochemistry model, with the capability of using a variety of physical parameterizations. The regional coupled model has been implemented and tested over some of the COordinated Regional climate Downscaling Experiment (CORDEX) domains and more regional settings featuring climatically important coupled phenomena. Regional coupled ocean‐atmosphere models can be especially useful tools to provide information on the mechanisms of air‐sea interactions and feedbacks occurring at fine spatial and temporal scales. RegCM‐ES shows a good representation of precipitation and SST fields over the domains tested, as well as realistic simulations of coupled air‐sea processes and interactions. The RegCM‐ES model, which can be easily implemented over any regional domain of interest, is open source, making it suitable for usage by the broad scientific community.
